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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903696.1_cds_XP_016453801.1_47892
CDS Infomation

[gene=LOC107778116] [db_xref=GeneID:107778116] [protein=PGR5-like protein 1A, chloroplastic] [protein_id=XP_016453801.1] [location=complement(join(28641..28710,28803..28900,28982..29092,29650..29701,30153..30229,30326..30382,30848..30948,31059..31155,31293..31402,33744..33957))] [gbkey=CDS]
Sequence

ATGGCGACCAAACTTGGGTTCAGTATGACAAGTTCTCGGCTTTTTCATGCCCCTTTTAAA
AGACCAATTTTTTCTGCTTCACTACCTGCTGCTTCATCTTCTTCTTCTTCTTCTTCGCCA
AGGCTGCCATTGATCCCTTTTGGTGCCAGCAGAAAGTTATCTATTCGAAAAAGGTTGTTG
GTTCTCTCCCCTAAGGCCACTACTGATCAGCCAGGTCAGGTCCAAGAGGATGAGGACAGT
AAAATATTGCAGTATTGTAGCATTGACGGAAAGGGGAAGAAATCTATGGGGGAAATGGAA
CAAGAGTTTCTTCAAGCACTACAATCATTCTATTATGAAGGAAAGGCCATCATGTCAAAT
GAAGAATTTGATAACCTCAAGGAAGAATTAATGTGGGAAGGGAGCAGCGTTGTCATGCTA
AGTGCTGATGAACAGAGATTTTTGGAAGCTTCTATGGCTTATGTATCTGGGAATCCGATT
ATGACAGACCAAGAGTTTGACAAGCTGAAGTTGAAACTTAAGATGGATGGCAGTGATATT
GTGGTTGAGGGTCCACGGTGCAGTCTCCGTAGTAGAAAGGTTTATAGTGACCTTTATGTA
GATTATCTGAGGATGTTCTTGCTAAATGTCCCCGCAGCTGTTGTTGCGCTTGGATTGTTC
TTCTTCCTCGACGATATCACTGGATTTGAGATCACCTATCTTTTGGAGCTTCCGGAGCCA
TTCAGTTTCATTTTCACGTGGTTTGCTGCTTTGCCCTTCATATTGTGGCTATCCTTTACA
ATTACAAATGCTATCATTAAAGATTTTCTGATCTTGAAGGGCCCCTGTCCGAATTGTGGA
ACAGAAAACACTTCCTTCTTCGGTACCATACTATCTGTGTCTAGTGGAGGTAACACTAAC
AAAGTGAAATGCGCAAATTGTGGAACGGATATGGTCTATGATTCTGGCACACGTTTAATC
ACATTGCCGGAAGGAAGCAGTGCATGA

Peptide Sequence

PEP ID

XP_016453801.1
PEP Infomation

PREDICTED: PGR5-like protein 1A, chloroplastic [Nicotiana tabacum]
Sequence

MATKLGFSMTSSRLFHAPFKRPIFSASLPAASSSSSSSSPRLPLIPFGASRKLSIRKRLL
VLSPKATTDQPGQVQEDEDSKILQYCSIDGKGKKSMGEMEQEFLQALQSFYYEGKAIMSN
EEFDNLKEELMWEGSSVVMLSADEQRFLEASMAYVSGNPIMTDQEFDKLKLKLKMDGSDI
VVEGPRCSLRSRKVYSDLYVDYLRMFLLNVPAAVVALGLFFFLDDITGFEITYLLELPEP
FSFIFTWFAALPFILWLSFTITNAIIKDFLILKGPCPNCGTENTSFFGTILSVSSGGNTN
KVKCANCGTDMVYDSGTRLITLPEGSSA

Transcript Sequence

Gene sequence data has not been registered.